Gene Mutations????

K

Kaitsmom

Guest
Hey does anyone know anything about gene mutations and do they determine severity of cystic fibrosis?? Just wondering, went to clinic today and found out Kaits mutation. I tried finding info on her mutation but had little luck. Do you guys know of any links where i could find info in this area? I would greatly appreciate any help!!

Thanks

Kaitsmom<img src="i/expressions/rose.gif" border="0">
 

anonymous

New member
Genotype often cannot predict phenotype, but if you would like to research specific gene mutations the Cystic Fibrosis Mutation Database is a good place to start. You can search it, or try directly to:<a target=new class=ftalternatingbarlinklarge href="http://www.genet.sickkids.on.ca/cftr/">Text</a>

Also, the mutations are classified I-V, here's a summary I found:

Class I mutations lead to defects in the synthesis of stable CFTR mRNA transcripts resulting in absence of the CFTR protein. About half of all mutations in CFTR (encompassing premature termination, exon skipping, aberrant mRNA splicing, and frameshifts) are thought to fall into this class and result in complete loss of CFTR protein/function.

Class II mutations, including F508, complete protein translation but produce an abnormal protein that fails to escape the endoplasmic reticulum. Little or no CFTR reaches the plasma membrane, and the absence of all surface CFTR results in a severe phenotype. It is being increasingly recognized that mutations in unrelated genes can create defective proteins, which fail to traffic properly through the cell. Classically, missense mutations creating an abnormal protein were thought to be relatively benign or less consequential than nonsense mutations (null) or large deletions. This is no longer strictly the case because examples from CF and other inherited disorders demonstrate that a synthesized protein that fails to mature along the normal biosynthetic pathway often becomes quite destructive (7).

Class III mutations disrupt activation and regulation of CFTR at the plasma membrane. Thus biosynthesis, trafficking, and processing are undisturbed, but the channel may be defective with respect to ATP binding and hydrolysis, or phosphorylation. Mutations, such as G551D, tend to be associated with a severe phenotype.

Class IV mutations affect chloride conductance or channel gating and thus result in reduced chloride current. As might be expected, mutations in this class, such as R117H or P574H, are thought to confer a milder phenotype.

Class V mutations reduce the level of normal CFTR protein by alterations in the promoter or by altering splicing. Currently it is thought that a reduction in mRNA to less than 10% of normal results in disease in CF. Examples of Class V mutations include 3849 + 10kb CT, A455E, and 5T.

You may have to ask your doctor to identify the classification of your specific gene mutations. It's all pretty complicated but I think as parents we should try to be well informed. Hope this helps in some way.


Maria (mother of three daughters, the youngest, Samantha w/cf)
 

anonymous

New member
What is your child's type? Although you cannot always determine severity by the type, you can get an idea of what you may be facing...the last post may confuse you....sorry last poster, but for a newly diagnosed person, this is quite confusing.

Anyway, my best advise is to ask your CF Clinic specialist...they will hopefully help you the most...if not, come back here <img src="i/expressions/face-icon-small-smile.gif" border="0">
 

serendipity730

New member
Mutations do not really correlate with severity of LUNG disease. They do correlate with pancreatic insufficieny. For example, I am a double delta F508 (the most common mutation) and have a fair amount of digestive problems (meconeum illeus at birth, 2 subsequent bowl blockages, and a hefty dose of enzymes.) However, my lung disease is only at the high end of moderate. So, regardless of what the mutation is, lung disease can vary. To kinda put that first post in layman's terms. The first class of mutations includes those in which no CFTR or very little is made. Technically, this is considered the most severe class....but that only means digestive disease for the most part. In the second class, the CFTR isn't made right, so it doesn't get to where it needs to go. In the third class, the CFTR isn't regulated correctly, so again, it doesn't work. In the fourth class, the CFTR doesn't work properly due to electical charge. In case you don't know, CFTR is a protein on the cell membrane that lets water, sodium, and chloride in and out of the cell. It is found in the pancreas, respiratory tract, and liver. So, it's good to know your daughter's mutations, (also called genotype) but it isn't necessarily going to tell you a whole lot about prognosis. Two people with the same mutation (even in the same family!) can have very different cases of disease.<a target=new class=ftalternatingbarlinklarge href="http://www.geneclinics.org/servlet/access?db=geneclinics&site=gt&id=8888892&key=3f-PxcI9BdFRr&gry=&fcn=y&fw=icJB&filename=/profiles/cf/index.html">Here's a website (scientific, but it tells you what mutaitons is which type.)</a> Good Luck!
 

anonymous

New member
Hello everyone
You are right this is kinda confusing. My daughters mutations are 508 and N1303K. I am trying to understand more about this so thanks for all of your help
 
J

Jenica

Guest
We were told by our genetic counselor that our baby's CF would be a "very mild" form because of the mutation that my husband carries. From what I've been reading though, it sounds as though the effect on the pancreas can be determined based on the mutation, but the severity of the lungs cannot. Is this correct? And isn't it the decreased capacity of the lungs that ultimately proves fatal? If this is all true, then I'm not sure how a sufficient pancreas will extend the life expectancy.

This is kind of a blow to me, because I have been comforting myself thinking that our baby will have a more mild form of the disease, and now I'm not sure that that is true. We had been told that although they hadn't done sufficient scientific studies to call it concrete, those will milder forms of the gene lived longer and were healthier.
 

anonymous

New member
How sufficient the pancreas is will correlate to some degree with regards to life expectancy.
If the pancreas does not work your body does not absorb needed nutrients to sustain life and help fight off infection. Many studies have been conducted not only on CF - but, other diseases which show that nutritional status effects life expectancy.
 

anonymous

New member
Hi everyone,

You're right - genetics IS confusing and complicated, especially if like me, you have no formal education in it. I'm sorry if my post confused anyone. My daughter is only two, so I'm pretty new to all of this too. But because of the rough road she has already had, I have tried to learn the most I can about this genetic "stuff".

Mary explained the classifications in a way that made it very easy to understand. (Thanks Mary!) I have found that cell illustrations (labeled drawings) also help because you can "see" what you are reading about.

From what I have been told at clinic, the only thing that can be accurately predicted by gene mutation is pancreatic function. A previous poster also mentioned that those with pancreatic sufficiency are sometimes more healthy because they can absorb their nutrients. Our doctor has always told us that poor nutrition (especially from birth to age three) often equates to poor lung function down the road.

It's good to ask the experts (docs/genetic counselors) but I have found that they will only explain what they think you can understand. If you do your homework beforehand, they seem to give out more information.

Maria
 

anonymous

New member
Mary

Thank You very much, I understand alot better now. science was not one of my favorite subjects but you have helped me alot. Good luck with your classes,

Thanks again

Kaitsmom<img src="i/expressions/rose.gif" border="0">
 
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